[daip] POPSGN issue

[Eric Greisen]

Tracy Clarke (Foreign National) wrote:
> Hi Eric,
> 
> Thanks, I ran the do_daily script but it had issues with the library files:
> 
> crazyhorse(13:54)_2 ./do_daily.crazyhorse
> AIPSUPD - cd /crazyhorse/usr/local/AIPS/31DEC11/LINUX/UPDATE
> AIPSUPD - RunTime is 20110204.185520
> AIPSUPD - LogFile is 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/UPDATE/UPD20110204
> .185520.LOG
> AIPSUPD - ErrorFile is 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/UPDATE/UPD201102
> 04.185520.ERR
> AIPSUPD - Using CVS for copying files.
> AIPSUPD - calling UPDCVS
> cvs update: warning: 31DEC11/COPYING was lost
> cvs update: warning: 31DEC11/DIRECT.FOR was lost
> cvs update: warning: 31DEC11/TIMESTAMP was lost
> cvs update: warning: 31DEC11/SYSTEM/UNIX/UPDATE/UPDLSTDAT.c was lost
> cvs update: warning: 31DEC11/SYSTEM/UNIX/UPDATE/UPDOBSLT.c was lost
> UPDCVS - cvs update of 31DEC11 completed
> cvs update: warning: TEXT/PUBL/AIPSMEMO27.OLD was lost
> cvs update: warning: TEXT/PUBL/AIPSMEMO46.OLD was lost
> UPDCVS - cvs update of TEXT completed
> AIPSUPD - calling UPDCONTROL
> UPDCONTROL - Syncing LASTGOOD.DAT.mnj.aoc.nrao.edu
> UPDCONTROL - calling UPDOBSLT on sorted PUTBCK, REMOVE
> UPDCONTROL - UPDOBSLT done, new PUTBCK.UPD
> UPDCONTROL - calling UPDSRTUNQ REMOVE
> UPDCONTROL - calling UPDLSTDAT REASONS.UPD
> UPDCONTROL - calling UPDSRTUNQ PUTBCK
> UPDCONTROL - applying COMRPL/LNK.ADD to .UPD files
> UPDCONTROL - removing any aipssrc compiles/links
> UPDCONTROL - Calling UPDSRTUNQ COMRPL
> UPDCONTROL - Calling UPDSRTUNQ COMLNK
> UPDCONTROL - Done.
> UPDCONTROL - created temporary file 20110204.185520.SPECIAL
> UPDCONTROL - nothing special, removing 20110204.185520.SPECIAL
> UPDCONTROL - regenerating COMRPL.UPD.SUM
> UPDCONTROL - regenerating COMLNK.UPD.SUM
> AIPSUPD - UPDCONTROL done
> AIPSUPD - calling UPDREMOVE (watch those libraries)
> AIPSUPD - UPDREMOVE apparently worked
> UPDRSYNC:  doing binary synchronization
> UPDRSYNC: rsync SYSTEM
> UPDRSYNC: rsync LIBR
> UPDRSYNC: rsync LOAD
> rsync: relocation error: 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/LIBR/INTELCMP/libc.so.6: symbol 
> _dl_tls_get_addr_soft, version GLIBC_PRIVATE not defined in file 
> ld-linux.so.2 with link time reference
> cat: relocation error: 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/LIBR/INTELCMP/libc.so.6: symbol 
> _dl_tls_get_addr_soft, version GLIBC_PRIVATE not defined in file 
> ld-linux.so.2 with link time reference
> cat: relocation error: 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/LIBR/INTELCMP/libc.so.6: symbol 
> _dl_tls_get_addr_soft, version GLIBC_PRIVATE not defined in file 
> ld-linux.so.2 with link time reference
> cp: relocation error: 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/LIBR/INTELCMP/libc.so.6: symbol 
> _dl_tls_get_addr_soft, version GLIBC_PRIVATE not defined in file 
> ld-linux.so.2 with link time reference
> cp: relocation error: 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/LIBR/INTELCMP/libc.so.6: symbol 
> _dl_tls_get_addr_soft, version GLIBC_PRIVATE not defined in file 
> ld-linux.so.2 with link time reference
> AIPSUPD - calling UPDREPORT
> /bin/sh: relocation error: 
> /crazyhorse/usr/local/AIPS/31DEC11/LINUX/LIBR/INTELCMP/libc.so.6: symbol 
> _dl_tls_get_addr_soft, version GLIBC_PRIVATE not defined in file 
> ld-linux.so.2 with link time reference
> AIPSUPD - UPDREPORT done, MNJ finished.

Does not look good.

I have removed those libraries from the aips rsync area and you should 
remove them
rm  $AIPS_ROOT/31DEC11/LINUX/LIBR/INTELCMP/libc*

Then you will have to upgrade your OS.  The helpdesk people suspect that
you attempted to upgrade to a 64-bit kernel on a machine that cannot do
64-bit kernels.  Be very careful to stay in the 32-bit kernel mode and 
an upgrade should work.  They do not remove support for hardware in new 
releases, they just add more.

Eric