[daip] AIPS compilation problem
Philip Lah
plah at mso.anu.edu.au
Fri Apr 8 12:04:15 EDT 2011
Hello Eric,
when I try and run the AIPS binary installation I eventually reach this
point:
Data disk assignments:
DADEVS.PL: This program is untested under Perl version 5.012
(Using global default file /home/AIPS/AIPS/DA00/DADEVS.LIST for
DADEVS.PL)
DADEVS.PL error - no disks selected at all
This is a FATAL error and nothing in AIPS will work.
*********************************************************
HELP! No Defined data areas! You can proceed now to run
program FILAIP, but you may see LOTS of complaints about
not being able to access the message file. If you think
there should have been some data areas defined, please
check DADEVS.LIST or .dadevs files, or AIPSASSN.\*
*********************************************************
If you want to proceed, enter YES (uppercase) now:
YES
Starting up FILAIP (RELEASE OF 31DEC11)
----------------------------------------------------------------------
Copyright (C) 1995-2011
Associated Universities, Inc. Washington DC, USA.
This program is free software; you can redistribute it and/or
modify it under the terms of the GNU General Public License as
published by the Free Software Foundation; either version 2 of
the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public
License along with this program; if not, write to the Free
Software Foundation, Inc., 675 Massachusetts Ave, Cambridge,
MA 02139, USA.
Correspondence concerning AIPS should be addressed as follows:
Internet email: aipsmail at nrao.edu.
Postal address: AIPS Project Office
National Radio Astronomy Observatory
520 Edgemont Road
Charlottesville, VA 22903-2475 USA
----------------------------------------------------------------------
Password:
# interactive AIPS, # batch queues (2 I)
2
**** MORE VALUES PLEASE :
8
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:BQD000000; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZFIO: OPER = WRIT LUN = 15 NREC = 3
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZFI2: REQUEST FOR BYTES 2049 THRU = 3072 BEYOND EOF = 2048
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZERROR: IN ZFI2 ERRNO = 22 (Invalid argument)
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: FILE TYPE BQ WRITE ERROR 3 3
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:BAD001001; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:BAD002001; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:BAD001002; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:BAD002002; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:BAD001003; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:BAD002003; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TDD000004; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:ICD000000; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREA2: TROUBLE TRANSLATING LOGICAL = DA01
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: DISK 1 NOT FOUND FOR DA01:MSD001000.001;
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: FILE TYPE MS CREATE ERROR 2
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE TSTMEM:MED000000; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000001; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000002; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000003; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000004; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000005; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000006; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000007; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000008; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED000009; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED00000A; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:MED00000B; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: Init POPS memory files 1 through 12 with program POPSGN
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:SPD000000; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:ACD000000; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: AC FILE NOT INITIALIZED. USE FILINI IF YOU REALLY MEAN IT
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001001; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001002; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001003; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001004; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001005; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001006; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001007; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001008; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD001009; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TPD00100A; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:GRD000000; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: GR FILE NOT INITIALIZED. USE FILINI IF YOU REALLY MEAN IT
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:PWD000000; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: PW FILE NOT INITIALIZED. USE FILINI IF YOU REALLY MEAN IT
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: ZCREAT: FILE DA00:TCD000001; ALREADY EXISTS
ZMSGOP: VOLUME 1 FOR FILE DA01:MSD001000.001; NOT FOUND
MSGWRT ERROR 3 AT OPEN
FILAI1: Done!
I have checked DADEVS.LIST and my data area is defined as it is in NETSP.
I cannot find the .dadevs file and the only unusual thing that I can
potentially see in the AIPSASSN.\* is that
setenv DATA_ROOT /DEFINE_ME
As such I have no idea why the data area is not being defined. I am not
even sure whether this is the actual problem. I did run LOGIN.CSH and RUN
FILAIP as suggetted but this did not help.
After struggling with this for a while I gave up and tried the text
installation istead.
Bye
Philip Lah
On Fri, 8 Apr 2011, Eric Greisen wrote:
> Philip Lah wrote:
>> Hello daip at nrao.edu,
>>
>> I have been trying to install AIPS on a Fedora 14 Linux 64bit machine
>> without sucess. Frank Briggs (my supervisor) suggested I contact you.
>>
>> I first tried a binary installation and got nowhere so I have been
>> working on getting a Text installation working.
>>
>> I have reached the stage of INSTEP2 but this fails with:
>>
>> AipsWiz: Error: INSTEP2 failed, no point in proceeding.
>>
>>
>> Looking in the INSTEP2.LOG there are the below failed compliation message:
>>
>> COMRPL : Compile failed!
>> COMRPL : Deleted /home/AIPS/AIPS/31DEC11/LNX64/PREP/UVDESC.f
>>
>> COMRPL : Compile failed!
>> COMRPL : Deleted /home/AIPS/AIPS/31DEC11/LNX64/PREP/POSITION.f
>>
>>
>> The only other problems I could find in the INSTEP2.LOG were a series of
>> messages like this:
>>
>>
>> /home/AIPS/AIPS/31DEC11/LNX64/PREP/POSITION.f:679: (continued):
>> CALL IMDGET (OUT, 'CRVAL', TYPE, DIM, CRVAL, CDUMMY, IERR)
>> 2
>> Argument #5 of `imdget' is one precision at (2) but is some other precision
>> at (1) [info -f g77 M GLOBALS]
>>
>>
>> I am not sure whether or not these would be a fatal errors.
>>
>>
>> I am at a loss on how to fix these compilation problems. I have a
>> suspicion that it may be due to the compiler options I used. I do not have
>> access to ifort or icc so I am using g77 and gcc. In order to get these to
>> work I had to remove several of the Compiler options.
>>
>> Currently I am using g77 with
>>
>> -c -ff90 -ip
>>
>> (previously with ifort -c -axWPT -w90 -w95 -cm -ip -save all)
>>
>> and gcc with
>>
>> -c -O3 -ip -I/home/AIPS/AIPS/31DEC11/INC -D_FILE_OFFSET_BITS=64
>> -DHAVE_LINUX_GLIBC
>>
>> (previously with icc -c -O3 -ip -axWPT -I/home/AIPS/AIPS/31DEC11/INC
>> -D_FILE_OFFSET_BITS=64 -DHAVE_LINUX_GLIBC that is no -axWPT used with
>> gcc)
>>
>> It is possible that I need to add some options for g77 and gcc to replace
>> the ones I removed in order for ISTEP2 to compile. It is also possible
>> that it is something completely different going wrong.
>>
>> Any help that you could provide would be most welcome.
>>
>> Bye
>> Philip Lah
>
> I would like to know what your problems with the binary installation were.
> Over 90% of our sites now appear to be using the binary installation and so
> avoid the issues of incompatible compilers etc.
> In FDEFAULT.SH there are options indicated for gfortran and for f77 but it is
> known that some versions of these compilers do not work correctly.
> Furthermore, your -ff90 seems to assert that the code is Fortran 90 compliant
> which it probably is not. It is F77 code. The warning message points out an
> "issue" which we handle carefully in the code in which the formal data types
> deliberately do not match across call sequences. If we were to use a
> compiler that required a match it would literally take months to change
> things - I know because the code line above used to omit that character form
> and try to handle even that across the boundary (which is not legal in most
> Fortrans) so I had to go fix it. If real vs integer vs array vs ??? had to
> be fixed the problem would be vastly more difficult. Let us try to solve
> your binary install issues - you will get executables that run faster and are
> expected to work.
>
> Eric Greisen
>
**************************************************
Philip Lah
Postdoctoral Fellow, joint appointment at
National Centre for Radio Astrophysics
and
Australian National University
Home Page: http://www.mso.anu.edu.au/~plah/
**************************************************
More information about the Daip
mailing list