<div dir="ltr">Are you sure you have g++ installed?<br>I think it's in package build-essential in debian...</div><div class="gmail_extra"><br><div class="gmail_quote">On 10 July 2017 at 13:30, Jongsoo Kim <span dir="ltr"><<a href="mailto:jskim@kasi.re.kr" target="_blank">jskim@kasi.re.kr</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="word-wrap:break-word">
<font face="arial, helvetica, sans-serif" color="#000000" style="font-size:small;font-variant-ligatures:normal;background-color:rgb(255,255,255)">Dear DIFX users,</font>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:small;font-variant-ligatures:normal">
<font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><br>
</font></div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:small;font-variant-ligatures:normal">
<font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)">I am trying to install DiFX 2.4.1 in a MarkB+ in order to do remote distributed correlation using the native mode of Mark5 for the KVN observations.
The installation options are as follows,</font></div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:small;font-variant-ligatures:normal">
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">./install-difx --noipp --nodoc --mk5daemon</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)">The above commend compiles packages of "difxio", "difxmessages", and "mark5access" without any problems. But it generates the
attached error message when it comes to the mpifxcorr package. </font></p>
<p class="m_-9206662427791450486gmail-p1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)">The Mark5B+ system has Debian Wheezy 32bit OS. The output of "uname -a" is as follows.</font></p>
<p class="m_-9206662427791450486gmail-p1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)">2.6.32-5-686 #1 SMP Mon Sep 23 23:00:18 UTC 2013 i686 GNU/Linux<br>
</font></p>
<p class="m_-9206662427791450486gmail-p1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)">Most of the Debian packages required for the difx described in the difx web site were installed except openmpi.</font></p>
<ul class="m_-9206662427791450486gmail-ul1">
<li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s1"></span><span class="m_-9206662427791450486gmail-s2">pkg-config</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">bison</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">flex</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">libexpat1-dev</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">fftw3-dev</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">autoconf</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">automake</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">libtool</span></font></li><li class="m_-9206662427791450486gmail-li1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s3"></span><span class="m_-9206662427791450486gmail-s2">gfortran</span></font></li></ul>
<p class="m_-9206662427791450486gmail-p1"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)">The openmpi 1.10.2 was manually installed with <span style="font-size:14px">--enable-heterogeneous. Do you have
any idea to sort out the problem that I have?</span></font></p>
<p class="m_-9206662427791450486gmail-p1"><span style="color:rgb(0,0,0);font-family:arial,helvetica,sans-serif;font-size:14px">I have the other question. Is there any body who tried the native correlation with Mark5B+, whose OS is the 64bit one? If any, please
tell me your successful (or unsuccessful) story to me.</span><br>
</p>
<p class="m_-9206662427791450486gmail-p1"><span style="font-size:14px;background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">Best regards,</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span style="font-size:14px;background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">Jongsoo</font></span></p>
</div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:small;font-variant-ligatures:normal">
<font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)">------------------------------</font></div>
<div style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:small;font-variant-ligatures:normal">
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">Making mpifxcorr</font></span></p>
<p class="m_-9206662427791450486gmail-p2"><font face="arial, helvetica, sans-serif" color="#000000" style="background-color:rgb(255,255,255)"><span class="m_-9206662427791450486gmail-s1"></span><br>
</font></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">Reconfiguring mpifxcorr</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><a href="http://configure.ac:1" target="_blank">configure.ac:1</a>: warning: AC_INIT: not a literal: Adam Deller <<a href="mailto:adeller@astro.swin.edu.au" target="_blank">adeller@astro.swin.edu.au</a>></font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><a href="http://configure.ac:1" target="_blank">configure.ac:1</a>: warning: AC_INIT: not a literal: Adam Deller <<a href="mailto:adeller@astro.swin.edu.au" target="_blank">adeller@astro.swin.edu.au</a>></font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><a href="http://configure.ac:1" target="_blank">configure.ac:1</a>: warning: AC_INIT: not a literal: Adam Deller <<a href="mailto:adeller@astro.swin.edu.au" target="_blank">adeller@astro.swin.edu.au</a>></font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><a href="http://configure.ac:1" target="_blank">configure.ac:1</a>: warning: AC_INIT: not a literal: Adam Deller <<a href="mailto:adeller@astro.swin.edu.au" target="_blank">adeller@astro.swin.edu.au</a>></font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><a href="http://configure.ac:5" target="_blank">configure.ac:5</a>: installing `./install-sh'</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><a href="http://configure.ac:5" target="_blank">configure.ac:5</a>: installing `./missing'</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">src/Makefile.am: installing `./depcomp'</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">checking for a BSD-compatible install... /usr/bin/install -c</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">checking whether build environment is sane... yes</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">checking for a thread-safe mkdir -p... /bin/mkdir -p</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">checking for gawk... gawk</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">checking whether make sets $(MAKE)... yes</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">checking whether the C++ compiler works... no</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">configure: error: in `/root/DiFX-2.4.1/mpifxcorr':</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">configure: error: C++ compiler cannot create executables</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">See `config.log' for more details</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">Traceback (most recent call last):</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><span class="m_-9206662427791450486gmail-Apple-converted-space"> </span>File "./install-difx", line 667, in <module></font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><span class="m_-9206662427791450486gmail-Apple-converted-space"> </span>run(configstring)</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><span class="m_-9206662427791450486gmail-Apple-converted-space"> </span>File "./install-difx", line 353, in run</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000"><span class="m_-9206662427791450486gmail-Apple-converted-space"> </span>raise RuntimeError, "Error running " + cmd + " in
" + os.getcwd()</font></span></p>
<p class="m_-9206662427791450486gmail-p1"><span class="m_-9206662427791450486gmail-s1" style="background-color:rgb(255,255,255)"><font face="arial, helvetica, sans-serif" color="#000000">RuntimeError: Error running ./configure CXX=/opt/openmpi-1.10.2 --prefix=/opt/difx/2.4.1 in /root/DiFX-2.4.1/mpifxcorr</font></span></p>
</div>
</div>
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